Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CBO0790Putative membrane protein. (259 aa)    
Predicted Functional Partners:
CBO2207
Pfam match to entry PF00903 Glyoxalase,Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily, score 18.6, E-value 3.3e-05.
      
 0.596
CBO0778
Putative membrane protein.
  
     0.529
CBO0856
Putative acetyltransferase.
  
     0.527
CBO2070
Conserved hypothetical protein.
  
     0.491
CBO0560
Putative membrane protein.
  
     0.457
thiD1
Phosphomethylpyrimidine kinase; This CDS is also similar to CBO0771 (52.308 identity in 260 aa overlap).
      
 0.437
thiD2
Phosphomethylpyrimidine kinase; This CDS is also similar to CBO0451 (52.308 identity in 260 aa overlap).
      
 0.437
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
     
 0.437
CBO1781
Putative exported protein; No significant database matches.
  
     0.429
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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