STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO0798Flagellin. (473 aa)    
Predicted Functional Partners:
fliS
Flagellar protein FliS.
 
 
 0.958
flgK
Flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
 
 
 0.928
fliY
Flagellar motor switch protein FliY.
 
 
 0.927
fliD
Flagellar hook-associated protein; C-terminal region is similar to Bacillus halodurans flagellar hook-associated protein 2 FliD or BH3614 SWALL:FLID_BACHD (SWALL:Q9K6W0) (532 aa) fasta scores: E(): 2.1e-14, 27.55 38d in 508 aa. Full length CDS is similar to Clostridium acetobutylicum flagellar hook-associated protein CAC2205 SWALL:Q97H10 (EMBL:AE007721) (638 aa) fasta scores: E(): 1e-23, 27.36 id in 826 aa.
 
 
 0.889
flgE
Flagellar hook protein.
 
 
 0.871
flgB
Flagellar basal-body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.857
fliG
Flagellar motor switch protein.
 
  
 0.855
fliM
Flagellar motor switch protein FliM.
 
  
 0.848
fliW
Putative flagella-related conserved hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
 
 0.842
CBO2227
Putative chemotaxis MotA protein.
 
  
 0.832
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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