STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
feoB-2Ferrous iron transport protein B; Similar to the C-terminal region of Escherichia coli ferrous iron transport protein b feob or b3409 SWALL:FEOB_ECOLI (SWALL:P33650) (773 aa) fasta scores: E(): 1.4e-13, 25.42 38d in 476 aa. (507 aa)    
Predicted Functional Partners:
feoB
Ferrous iron transport protein B; Similar to the N-terminal region of Escherichia coli ferrous iron transport protein b feob or b3409 SWALL:FEOB_ECOLI (SWALL:P33650) (773 aa) fasta scores: E(): 8.3e-22, 41.2 38d in 216 aa.
     0.994
feoA
Ferrous iron transport protein A.
 
  
 0.976
feoA-2
Putative ferrous iron transport protein A.
 
  
 0.879
feoA-3
Ferrous iron transport protein A.
 
  
 0.796
CBO1028
Putative ferrous iron transport protein.
  
  
 0.619
nifJ1
Putative pyruvate-flavodoxin oxidoreductase; Also similar to CBO2760 (65.74 38d).
     
 0.471
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.