STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO0845Putative ABC transporter, membrane protein. (264 aa)    
Predicted Functional Partners:
CBO0846
ABC transporter, ATP-binding protein.
 
  
 0.956
CBO0847
DNA-binding protein.
     
 0.915
CBO2612
Putative iron-sulfur protein.
     
 0.690
CBO2614
Putative glycosyl transferase.
    
 
 0.688
CBO1372
Putative ferric uptake regulatory protein.
      
 0.681
CBO2610
DedA family membrane protein.
      
 0.681
CBO2275
Putative lipoprotein.
  
     0.627
CBO0778
Putative membrane protein.
 
     0.620
CBO2132
Conserved hypothetical protein.
  
     0.619
CBO0621
Putative acetyltransferase.
  
     0.589
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.