Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO0846ABC transporter, ATP-binding protein. (305 aa)    
Predicted Functional Partners:
CBO0845
Putative ABC transporter, membrane protein.
 
  
 0.956
CBO0847
DNA-binding protein.
     
 0.930
CBO2614
Putative glycosyl transferase.
    
 
 0.689
CBO1372
Putative ferric uptake regulatory protein.
      
 0.681
CBO2610
DedA family membrane protein.
      
 0.681
CBO2612
Putative iron-sulfur protein.
      
 0.681
CBO1382
Putative ABC transporter, permease protein.
 
  
 0.499
CBO1383
Putative ABC transporter, permease protein.
 
    0.493
CBO0778
Putative membrane protein.
 
   0.465
sagI
Putative cytolysin ABC transporter; Similar to Streptococcus iniae SagI sagI SWALL:Q8GP10 (EMBL:AF465842) (372 aa) fasta scores: E(): 2.3e-37, 32.04 38d in 362 aa.
 
  
 0.464
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
Server load: low (16%) [HD]