STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO0927Putative iron-sulfur flavoprotein. (247 aa)    
Predicted Functional Partners:
CBO0664
Conserved hypothetical protein.
  
     0.591
CBO0328
Conserved hypothetical protein; Similar to the C-terminal region of Clostridium acetobutylicum uncharacterized conserved protein cac3492 SWALL:Q97DI5 (EMBL:AE007846) (290 aa) fasta scores: E(): 3.4e-15, 41.04 38d in 134 aa.
  
     0.583
CBO0928
Putative phosphohydrolase.
 
     0.533
CBO2350
Phage capsid protein.
  
     0.524
CBO0663
Conserved hypothetical protein.
  
     0.479
CBO1546
Putative glyoxalase.
  
     0.470
CBO0926
Putative CAAX amino terminal protease.
       0.458
CBO0879
Putative iron-sulfur cluster-binding protein.
  
     0.441
CBO1597
Conserved hypothetical protein.
  
  
 0.434
CBO0327
Radical SAM superfamily protein; Similar to Clostridium acetobutylicum uncharacterized conserved protein cac3492 SWALL:Q97DI5 (EMBL:AE007846) (290 aa) fasta scores: E(): 2.2e-20,54.63 38d in 108 aa.
  
     0.424
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.