STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CBO0963Putative molybdenum ABC transporter, ATP-binding protein. (232 aa)    
Predicted Functional Partners:
modB
Molybdenum ABC transporter, permease protein.
  
 0.988
CBO1516
ABC transporter, permease protein.
 
 
 0.941
CBO1517
ABC transporter, permease protein.
 
 
 0.912
CBO0964
Putative membrane protein; Similar to the C-terminal region of Methanobacterium thermoautotrophicum hypothetical protein Mth922 mth922 SWALL:O27005 (EMBL:AE000867) (111 aa) fasta scores: E(): 1.1e-09, 41.74 38d in 103 aa.
 
     0.816
CBO1518
ABC transporter, substrate-binding lipoprotein.
 
 
 0.794
modA
Molybdate-binding periplasmic protein precursor.
 
   
 0.750
CBO0107
Solute-binding protein; Similar to Agrobacterium radiobacter lactose-binding protein precursor LacE SWALL:LACE_AGRRD (SWALL:P29822) (422 aa) fasta scores: E(): 1.9e-12, 21.24 id in 386 aa, and to Clostridium acetobutylicum sugar-binding periplasmic protein cac2912 SWALL:Q97F41 (EMBL:AE007788) (432 aa) fasta scores: E(): 4.3e-18,22.63 38d in 433 aa.
  
 
 0.746
CBO0770
Thiaminase I precursor.
  
 
 0.746
CBO3221
Putative ABC transporter periplasmic binding protein.
  
 
 0.746
modB-2
Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     0.708
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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