STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO0964Putative membrane protein; Similar to the C-terminal region of Methanobacterium thermoautotrophicum hypothetical protein Mth922 mth922 SWALL:O27005 (EMBL:AE000867) (111 aa) fasta scores: E(): 1.1e-09, 41.74 38d in 103 aa. (242 aa)    
Predicted Functional Partners:
modB
Molybdenum ABC transporter, permease protein.
 
    0.823
CBO0963
Putative molybdenum ABC transporter, ATP-binding protein.
 
     0.816
modA
Molybdate-binding periplasmic protein precursor.
 
     0.791
CBO0960
Putative molybdopterin biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
    0.597
CBO2224
Putative dinitrogenase iron-molybdenum cofactor protein.
 
     0.422
CBO2223
4Fe-4S cluster containing ParA family ATPase protein.
 
     0.420
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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