STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CBO1200Putative glucosylceramidase/O-glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family. (442 aa)    
Predicted Functional Partners:
CBO1199
Putative membrane protein; Similar to the C-terminal region of several transporters.
 
   
 0.836
CBO1198
AraC-family transcriptional regulator.
 
  
 0.686
CBO1202
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
  
 0.631
CBO1201
Putative sugar kinase.
     
 0.591
CBO1913
Putative fibronectin-binding protein.
   
    0.493
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.