Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
xdhA2Xanthine dehydrogenase, molybdenum binding subunit. (765 aa)    
Predicted Functional Partners:
xdhC2
Xanthine dehydrogenase iron-sulfur binding subunit.
 0.999
xdhB2-2
Xanthine dehydrogenase, FAD-binding subunit.
 0.998
xdhC1
Similar to Escherichia coli xanthine dehydrogenase iron-sulfur binding subunit xdhc or b2868 SWALL:XDHC_ECOLI (SWALL:Q46801) (159 aa) fasta scores: E(): 1.2e-15, 39.61 id in 154 aa, and to Clostridium tetani carbon monoxide dehydrogenase, small subunit ctc02474 SWALL:Q891A6 (EMBL:AE015944) (158 aa) fasta scores: E(): 4.4e-39, 62.5 id in 152 aa.
 0.995
CBO2850
Putative dehydrogenase, [2Fe-2S] binding subunit.
 
 0.991
guaD
Guanine deaminase.
    
 0.947
adeC
Adenine deaminase; Similar to Bacillus subtilis adenine deaminase AdeC or Ade or bsu14520 SWALL:ADEC_BACSU (SWALL:P39761) (577 aa) fasta scores: E(): 5e-63, 36.17 38d in 575 aa; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
 
  
 0.921
xdhB2
Similar to Escherichia coli xanthine dehydrogenase,FAD binding subunit XdhB or b2867 SWALL:XDHB_ECOLI (SWALL:Q46800) (292 aa) fasta scores: E(): 0.00013, 22.06 id in 281 aa, and to Bacillus cereus xanthine dehydrogenase fad-binding subunit bc3167 SWALL:Q81BJ0 (EMBL:AE017008) (279 aa) fasta scores: E(): 6.2e-54,52.89 38d in 276 aa.
 
 0.917
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
    
  0.902
xpt-2
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
    
  0.902
CBO2528
Conserved hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
    
  0.902
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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