Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO1304Putative heavy-meta-transporting P-type ATPase. (811 aa)    
Predicted Functional Partners:
CBO1305
Heavy-metal binding protein.
 
 
 0.895
CBO1303
Conserved hypothetical protein.
 
  
 0.886
CBO0058
Putative metal-binding protein; Similar to Pseudomonas sp periplasmic mercuric ion binding protein MerP SWALL:Q936U4 (EMBL:Y18360) (92 aa) fasta scores: E(): 0.64, 36.95 38d in 46 aa, and to Clostridium acetobutylicum predicted metal-binding protein of ferredoxin fold cac0302 SWALL:Q97M96 (EMBL:AE007544) (67 aa) fasta scores: E(): 7.5e-09, 43.28 38d in 67 aa.
  
 
 0.862
CBO1039
Putative heavy metal transporter.
  
 
 0.824
CBO0477
ArsR-family transcriptional regulator; Similar to Synechocystis sp. transcriptional repressor smtb homolog smtb or ziar or sll0792 SWALL:SMTB_SYNY3 (SWALL:Q55940) (132 aa) fasta scores: E(): 7.6e-17, 37.06 38d in 116 aa.
 
  
 0.755
tetM
Putative tetracycline resistance protein.
  
  
 0.693
merP
Heavy-metal-binding protein.
  
 
 0.586
CBO1118
Copper associated protein (copper ion binding protein).
  
 
 0.586
fhuD2
Iron-uptake system binding protein.
   
  
 0.565
nifJ1
Putative pyruvate-flavodoxin oxidoreductase; Also similar to CBO2760 (65.74 38d).
  
  
 0.541
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.