Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO1358ABC transporter, ATP-binding protein. (264 aa)    
Predicted Functional Partners:
CBO1357
ABC transporter, permease protein.
 0.998
CBO1356
ABC transporter, permease protein.
 
 0.996
CBO1359
ABC transporter, ATP-binding protein.
 
 
0.992
CBO1355
ABC transporter, substrate-binding lipoprotein.
 
 0.990
appC
Putative oligopeptide ABC transporter, permease protein.
 
 0.983
oppC
Oligopeptide transport system permease protein.
 
 0.964
CBO1677
Oligopeptide transport system, permease protein.
 
 0.953
appB
Putative oligopeptide ABC transporter, permease protein.
 
 
 0.924
CBO1676
Oligopeptide transport system permease protein.
 
 
 0.923
oppB
Oligopeptide ABC transporter, permease protein.
 
 
 0.923
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.