Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
CBO1680Phage transcriptional regulator. (119 aa)    
Predicted Functional Partners:
CBO1681
Putative phage-related protein; Similar to the C-terminal region of Frog adenovirus 1 33k protein SWALL:Q9IIH1 (EMBL:AF224336) (129 aa) fasta scores: E(): 6.5, 42.85 38d in 28 aa.
       0.773
CBO1679A
Phage regulatory protein.
  
    0.472
CBO1679
Phage integrase.
  
    0.470
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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