STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO1711Phage protein. (141 aa)    
Predicted Functional Partners:
CBO1710
Phage protein.
 
    0.847
CBO1712
Putative phage protein.
       0.773
CBO1712A
Putative phage protein; No significant database matches.
       0.757
CBO1713
Putative phage protein; No significant database matches.
       0.757
CBO1727
Scaffold protein.
 
     0.582
CBO2356
Phage terminase small subunit.
 
     0.539
CBO1714
Putative phage protein.
       0.534
CBO2352
Hypothetical phage protein.
  
     0.532
CBO1709
Putative phage protein.
       0.474
CBO2341
Hypothetical phage protein.
  
     0.429
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.