Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CBO1752Putative phage protein; No significant database matches; Also similar to CBO1654 (91.892 38d. in 74 aa overlap) and to CBO1651 (39.39 38d). (73 aa)    
Predicted Functional Partners:
CBO1751
Bacteriophage endolysin (N-acetylmuramoyl-L-alanine amidase); Also similar to CBO1653 (81.6 38d), CBO2325 (86.1 id.), CBO3016 (50.0 38d.).
       0.451
CBO1753A
Major spike protein (partial); Partial CDS. Similar to the C-terminal region of several phage proteins including Bacteriophage phi-X174 major spike protein G SWALL:VGG_BPPHX (SWALL:P03643) (175 aa) fasta scores: E(): 1.4, 37.83 38d in 37 aa, and to Bacteriophage S13 major spike protein G SWALL:VGG_BPS13 (SWALL:P07932) (175 aa) fasta scores: E(): 1.4, 35.48 38d in 31 aa; was marked partial.
       0.407
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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