STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gluDNAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (421 aa)    
Predicted Functional Partners:
glnA
Glutamine synthetase.
  
 
 0.946
gltD
Glutamate synthase [NADPH] small chain.
  
 0.943
gltA
Putative pyridine nucleotide-disulphide oxidoreductase.
  
 0.943
glsA
Glutaminase; Belongs to the glutaminase family.
     
 0.931
gadA
Glutamate decarboxylase alpha; Belongs to the group II decarboxylase family.
   
 
 0.913
nifH
Nitrogenase iron protein; Belongs to the NifH/BchL/ChlL family.
     
 0.911
arcC
Putative carbamate kinase; Belongs to the carbamate kinase family.
     
 0.911
CBO1014
Putative aromatic amino acid aminotransferase.
  
 
 0.910
aspC
Aspartate aminotransferase.
  
 
 0.910
aspC-2
Aspartate aminotransferase.
  
 
 0.910
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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