STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
closIAlpha-clostripain precursor. (527 aa)    
Predicted Functional Partners:
fliY
Flagellar motor switch protein FliY.
   
 
 0.849
CBO1442
Putative secreted protease (pseudogene); Extracellular zinc metalloprotease.
     
 0.620
CBO1443
Putative secreted protease; Extracellular zinc metalloprotease.
     
 0.620
CBO1444
Putative secreted protease; Extracellular zinc metalloprotease.
     
 0.620
CBO1445
Putative secreted protease; Also similar to CBO1440 (pseudogene), CBO1442,CBO1443, CBO1444, CBO1446.
     
 0.620
CBO1446
Putative secreted protease; Extracellular zinc metalloprotease.
     
 0.567
dnaX
DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
     
 0.537
ytaF
Putative membrane protein; Probably functions as a manganese efflux pump.
      
 0.531
CBO3385
Putative phosphopeptide-binding membrane protein.
  
  
 0.475
CBO2353
Hypothetical phage protein; N-terminal region is similar to Clostridium tetani conserved protein CTC01089 SWALL:Q896B9 (EMBL:AE015939) (566 aa) fasta scores: E(): 6.5e-24, 25.3 38d in 581 aa.
   
   0.421
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.