STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO1925Two-component sensor kinase. (487 aa)    
Predicted Functional Partners:
CBO1926
Two-component response regulator.
 0.997
CBO1585
Two-component response regulator.
 
 0.979
CBO1586
Two-component sensor histidine kinase.
  
 
0.929
CBO3349A
Two-component response regulator.
 
 0.816
CBO0970
Two-component response regulator.
 
 
 0.800
CBO1041
Two-component response regulator.
 
 0.794
CBO1968
Two-component response regulator.
 
 
 0.787
CBO2285
Two-component response regulator.
 
 
 0.785
CBO0786
Two component response regulator.
 
 
 0.783
CBO0610
Two-component response regulator.
 
 
 0.782
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.