STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO1967Two-component sensor kinase. (479 aa)    
Predicted Functional Partners:
CBO1968
Two-component response regulator.
 0.998
CBO1041
Two-component response regulator.
 
 0.902
CBO0607
Two-component response regulator.
 
 
 0.889
CBO0336
Similar to Clostridium acetobutylicum sensory transduction histidine kinase cac0903 SWALL:Q97KL4 (EMBL:AE007605) (683 aa) fasta scores: E(): 3e-47, 32.62 id in 610 aa.
 
 
0.884
CBO1524
Putative signaling protein.
  
 
 0.877
CBO0786
Two component response regulator.
 
 
 0.876
CBO0776
Two-component response regulator.
 
 
 0.839
CBO3349A
Two-component response regulator.
 
 0.830
CBO1926
Two-component response regulator.
 
 0.826
CBO2527
Two-component response regulator.
 
 0.826
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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