STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO1969Conserved hypothetical protein. (271 aa)    
Predicted Functional Partners:
CBO1970
Putative cobalt ABC transporter, permease protein.
       0.704
CBO1972
Putative membrane protein.
       0.583
CBO2243
Putative uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.580
ccmA-4
Putative cobalt ABC transporter, ATP-binding protein.
       0.578
CBO1489
Putative methylcobamide:CoM methyltransferase; Also similar to CBO1498 (40.6 38d.); Belongs to the uroporphyrinogen decarboxylase family.
  
     0.547
CBO1413
Conserved hypothetical protein.
  
     0.516
CBO1493
Putative methylcobamide:CoM methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.514
CBO1514
Conserved hypothetical protein.
  
     0.493
CBO2044
Putative TetR-family transcriptional regulator.
  
     0.409
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.