STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO1981Putative decarboxylase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (110 aa)    
Predicted Functional Partners:
CBO1982
Putative radical SAM superfamily protein.
 
    0.952
CBO2613A
Hypothetical protein; N-terminus is similar to thye N-terminal region of Streptomyces coelicolor hypothetical protein SCO3464 or SCE46.21 SWALL:Q9RKG8 (EMBL:AL939116) (210 aa) fasta scores: E(): 1.1e-13, 30.92 38d in 194 aa.
 
     0.663
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.647
CBO1980
Putative membrane protein; No significant database matches.
       0.584
CBO1979
Putative membrane protein.
 
     0.576
CBO2614
Putative glycosyl transferase.
 
     0.535
CBO1983
Conserved hypothetical protein.
  
    0.455
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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