STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
treBPTS system, trehalose-specific IIbc component. (475 aa)    
Predicted Functional Partners:
treA
Trehalose-6-phosphate hydrolase.
 
 
 0.996
ptbA
Similar to Salmonella typhimurium, and Salmonella typhi PTS system, glucose-specific IIa component Crr or stm2433 or sty2670 or t0424 SWALL:PTGA_SALTY (SWALL:P02908) (168 aa) fasta scores: E(): 1.4e-13, 40.58 id in 138 aa.
 0.995
ptsG
Similar to Bacillus subtilis PTS system,glucose-specific IIabc component PtsG or PtsX or Crr or bsu13890 SWALL:PTGA_BACSU (SWALL:P20166) (699 aa) fasta scores: E(): 3.7e-24, 52.56 38d in 156 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri PTS system, glucose-specific IIa component Crr or Gsr or Iex or Tgs or TreD or b2417 or c2952 or sf2472 or s2618 SWALL:PTGA_ECOLI (SWALL:P08837) (168 aa) fasta scores: E(): 2.1e-22, 42.35 38d in 170 aa.
 0.995
ptbA-2
PTS system, IIa component; Similar to Salmonella typhimurium, and Salmonella typhi PTS system, glucose-specific IIa component crr or stm2433 or sty2670 or t0424 SWALL:PTGA_SALTY (SWALL:P02908) (168 aa) fasta scores: E(): 3.7e-15, 40 38d in 150 aa.
 0.995
ptbA-4
Pts system, IIa component.
 
 0.957
treR
Trehalose operon transcriptional repressor.
 
  
 0.955
glvA1
Similar to Bacillus subtilis maltose-6'-phosphate glucosidase GlvA or GlvG or Glv-1 or bsu08180 SWALL:GLVA_BACSU (SWALL:P54716) (449 aa) fasta scores: E(): 3.5e-140, 77.44 38d in 439 aa; Also similar to CBO0289 (73.69 38d) and CBO0267 (48.19 38d); Also highly similar to CBO0289 (73.69 38d).
 
 
 0.936
glvA2
Similar to Bacillus subtilis maltose-6'-phosphate glucosidase GlvA or GlvG or glv-1 or bsu08180 SWALL:GLVA_BACSU (SWALL:P54716) (449 aa) fasta scores: E(): 7.5e-125, 68.55 38d in 442 aa, and to Escherichia coli probable 6-phospho-alpha-glucosidase GlvG or b3681 SWALL:GLVG_ECOLI (SWALL:P31450) (212 aa) fasta scores: E(): 7e-59, 72.68 38d in 205 aa; Also similar to CBO0278 (73.69 38d) and CBO0267 (49.21 38d); Also highly similar to CBO0278 (73.69 38d).
 
 
 0.935
ptsH
Putative phosphocarrier protein HPr.
  
 
 0.921
CBO1201
Putative sugar kinase.
  
 
 0.828
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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