Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBO2028Putative proton-dependent oligopeptide transporter; This CDS is also similar to the adjacent CDS,CBO2029, (77.828 38dentity in 442 aa overlap). (449 aa)    
Predicted Functional Partners:
CBO2463
Conserved hypothetical protein.
  
     0.662
CBO2479
Conserved hypothetical protein.
  
     0.650
prdA2
Putative subunit of proline reductase.
  
     0.593
prdA1
Putative proline reductase protein; Highly similar to CBO2480 (84.5 38d), CBO2483 (63.9 38d).
  
     0.584
prdD
Putative component of proline reductase.
  
     0.578
prdE
Putative component of proline reductase.
  
    0.572
pepIP
Proline iminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
 
   
 0.499
CBO1647
Signal-transduction and transcriptional-control protein (pseudogene); Putative prophage remnant.
  
     0.476
CBO2029
Putative proton-dependent oligopeptide transporter; This CDS is also similar to the adjacent CDS,CBO2028, (77.828 38dentity in 442 aa overlap).
 
    
0.409
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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