Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CBO2050Putative recombinase (partial); Pfam match to entry PF00239 resolvase, Resolvase, N terminal domain, score 41.5, E-value 2e-09. (335 aa)    
Predicted Functional Partners:
fliY
Flagellar motor switch protein FliY.
    
   0.740
CBO0043A
Similar to Clostridium tetani conserved protein ctc01787 SWALL:Q893M8 (EMBL:AE015942) (477 aa) fasta scores: E(): 5.7e-98, 58.62 38d in 481 aa, and to Bacillus anthracis conserved domain protein ba1754 SWALL:Q81SB1 (EMBL:AE017029) (366 aa) fasta scores: E(): 9.9e-18, 27.1 id in 380 aa.
  
     0.738
CBO1626
Putative membrane protein.
  
     0.735
CBO2766A
Putative glucose translocase.
  
  
 0.608
CBO1326
Putative cell wall hydrolase.
  
     0.600
CBO2228
Putative cell wall-associated protein; No significant database matches to the full length CDS. N-terminus is similar to the N-terminal regions of Bacillus subtilis N-acetylmuramoyl-L-alanine amidase cwlB precursor LytC or CwlB or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa) fasta scores: E(): 4.4e-06, 33.92 id in 336 aa, and Clostridium tetani putative S-layer protein/internalin A-like/N-acetylmuramoyl-L-alanine amidase ctc00696 SWALL:Q897N6 (EMBL:AE015938) (518 aa) fasta scores: E(): 5.4e-60, 49.18 38d in 370 aa.
  
     0.596
CBO0444
Putative cell wall binding protein; Similar to Bacillus subtilis N-acetylmuramoyl-L-alanine amidase cwlb precursor LytC or CwlB or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa) fasta scores: E(): 1.9e-30, 32.7 38d in 318 aa.
  
     0.564
CBO2764
Putative endonuclease.
 
     0.551
CBO0374
Putative cell Surface Protein; Similar to the N-terminal region of Clostridium difficile Cwp66 SWALL:Q9FA27 (EMBL:AF093106) (610 aa) fasta scores: E(): 1.7e-14, 30.85 38d in 350 aa, and to Bacillus subtilis N-acetylmuramoyl-L-alanine amidase CwlB precursor LycT or cwlb or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa) fasta scores: E(): 4.4e-08, 29.64 id in 361 aa.
  
     0.548
CBO2055
Glucose-1-phosphate thymidylyltransferase.
 
  
 0.509
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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