Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO2055Glucose-1-phosphate thymidylyltransferase. (353 aa)    
Predicted Functional Partners:
rmlB
Putative dTDP-glucose 4,6-dehydratase.
 
 
 0.999
CBO2715
Probable DTDP-4-dehydrorhamnose 3,5-epimerase.
  
 0.985
CBO2718
Glucose-1-phosphate cytidylyltransferase.
  
 
 0.965
CBO2685
UDP-galactopyranose mutase.
  
  
 0.949
gtaB
UTP--glucose-1-phosphate uridylyltransferase.
 
 
0.939
pgcA
Alpha-phosphoglucomutase.
  
 
 0.919
CBO3619
Putative phosphoglucomutase/phosphomannomutase.
  
 
 0.919
CBO2679
Putative UDP-glucose 4-epimerase.
 
  
 0.916
CBO2101
Putative tetracycline resistance protein; Similar to internal regions of database matches. Also highly similar to an internal region of CBO2104 (93.9 38d); was marked partial.
 
  
 0.909
wzx
O antigen repeat unit flippase.
 
  
 0.896
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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