STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO2102Putative glycosyltransferase. (449 aa)    
Predicted Functional Partners:
CBO2103
Putative glycosyltransferase.
 
 
0.855
CBO2766A
Putative glucose translocase.
  
  
 0.757
CBO2101
Putative tetracycline resistance protein; Similar to internal regions of database matches. Also highly similar to an internal region of CBO2104 (93.9 38d); was marked partial.
 
  
 0.654
CBO2055
Glucose-1-phosphate thymidylyltransferase.
 
  
 0.650
CBO0357
Putative signaling protein; Similar to Chromobacterium violaceum hypothetical protein cv0542 SWALL:AAQ58219 (EMBL:AE016911) (633 aa) fasta scores: E(): 2.3e-57, 35.07 38d in 536 aa.
  
  
 0.626
soj
Chromosome partitioning protein (sporulation initiation inhibitor protein).
  
 
 0.592
CBO2714
Putative CDP-4-dehydro-6-deoxy-D-gulose 4-reductase.
 
 
 0.530
CBO2702
Putative glycosyl transferase.
 
  
0.526
CBO2686
Putative sugar transferase.
 
  
 0.525
CBO2715
Probable DTDP-4-dehydrorhamnose 3,5-epimerase.
 
  
 0.519
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.