STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO2103Putative glycosyltransferase. (874 aa)    
Predicted Functional Partners:
CBO2102
Putative glycosyltransferase.
 
 
0.867
CBO2766A
Putative glucose translocase.
  
  
 0.835
CBO2055
Glucose-1-phosphate thymidylyltransferase.
 
  
 0.754
CBO2715
Probable DTDP-4-dehydrorhamnose 3,5-epimerase.
 
  
 0.748
rmlB
Putative dTDP-glucose 4,6-dehydratase.
 
  
 0.733
CBO2685
UDP-galactopyranose mutase.
  
  
 0.701
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 
 0.649
CBO2714
Putative CDP-4-dehydro-6-deoxy-D-gulose 4-reductase.
 
 
 0.610
CBO2681
Putative Cytidylyltransferase; Note that the C_terminal region is most similar to the Clostridial spore coat proteins.
  
  
 0.606
CBO2101
Putative tetracycline resistance protein; Similar to internal regions of database matches. Also highly similar to an internal region of CBO2104 (93.9 38d); was marked partial.
 
  
 0.598
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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