STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO2124Putative membrane protein. (370 aa)    
Predicted Functional Partners:
CBO2123
Conserved hypothetical protein.
 
     0.970
eutT
Conserved hypothetical protein.
 
     0.832
CBO2112
Conserved hypothetical protein.
 
     0.825
cutC
Putative pyruvate formate-lyase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily.
 
     0.824
eutJ
Putative ethanolamine utilization protein.
 
     0.778
pduA2
Propanediol utilization protein.
 
     0.775
eutQ
Putative ethanolamine utilization protein.
 
     0.763
CBO2125
Putative MerR-family transcriptional regulator.
 
   
 0.741
eutP
Putative ethanolamine utilization protein; Belongs to the EutP/PduV family.
 
     0.678
pduA1
Propanediol utilization protein.
 
     0.660
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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