STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO2136Two-component system response regulator. (223 aa)    
Predicted Functional Partners:
CBO2135
Two-component sensor kinase.
 
 0.969
CBO1395
Two-component sensor histidine kinase.
 
 0.844
CBO0336
Similar to Clostridium acetobutylicum sensory transduction histidine kinase cac0903 SWALL:Q97KL4 (EMBL:AE007605) (683 aa) fasta scores: E(): 3e-47, 32.62 id in 610 aa.
 
 0.841
CBO0273
Similar to Clostridium tetani two-component sensor histidine kinase ctc00393 SWALL:Q898Q0 (EMBL:AE015937) (352 aa) fasta scores: E(): 9.2e-107, 85.22 38d in 352 aa.
 
 0.838
CBO0319
Two-component sensor kinase; Similar to Bacillus cereus two component system histidine kinase bc4836 SWALL:Q816J4 (EMBL:AE017013) (340 aa) fasta scores: E(): 4.2e-48, 41.53 38d in 325 aa.
 
 0.835
CBO0340
Two-component sensor kinase; Similar to Clostridium acetobutylicum sensory transduction histidine kinase cac0903 SWALL:Q97KL4 (EMBL:AE007605) (683 aa) fasta scores: E(): 1.1e-45,34.81 38d in 586 aa.
 
 0.808
CBO0906
Two component sensor kinase.
   0.785
CBO2140
Putative ABC transporter, permease protein.
 
    0.782
CBO3349
Two-component sensor kinase.
 
   0.770
CBO0780
Two component sensor kinase.
  
   0.759
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.