STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO2152Putative PTS system, EIIA component. (145 aa)    
Predicted Functional Partners:
CBO2151
Putative PTS system, EIIB component.
 
 
 0.994
UlaA
Putative sugar transporter.
 
 
 0.993
ptsH
Putative phosphocarrier protein HPr.
 
 
 0.929
CBO2153
Putative transaldolase.
 
    0.754
CBO1991
PTS system, IIbc component.
 
  
 0.706
CBO3377
Putative ATPase; Displays ATPase and GTPase activities.
  
  
 0.614
CBO0655
PTS system, beta-glucoside-specific IIabc component.
  
  
 0.575
fruK
1-phosphofructokinase; This CDS is also similar to CBO1992 (35.644 identity in 303 aa overlap); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.523
pfkB
Probable sugar kinase; This CDS is also similar to CBO1763 (35.644 identity in 303 aa overlap); Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.523
bglF
PTS system, beta-glucoside-specific IIabc component.
   
  
 0.519
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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