STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO2173Conserved hypothetical protein. (279 aa)    
Predicted Functional Partners:
CBO2175
Hypothetical protein; Poor database matches. C-terminal region is weakly similar to the N-terminus of Archaeoglobus fulgidus hypothetical protein Af1867 SWALL:O28412 (EMBL:AE000974) (1004 aa) fasta scores: E(): 1.1e-05, 25.3 38d in 486 aa.
 
 
 
 0.989
CBO2171
Hypothetical protein; Weakly similar to Porphyromonas gingivalis CRISPR-associated protein, TM1791 family PG1983 SWALL:AAQ66956 (EMBL:AE017178) (253 aa) fasta scores: E(): 3.4e-08, 34.85 38d in 307 aa.
 
 
 
 0.986
CBO2172
Hypothetical protein.
   
 
 0.947
CBO2174
Conserved hypothetical protein.
   
 
 0.934
CBO2177
Putative membrane protein; No significant database matches.
 
     0.931
CBO2176
Hypothetical protein; Poor database matches. Weakly similar to Porphyromonas gingivalis hypothetical protein PG1988 SWALL:AAQ66961 (EMBL:AE017178) (480 aa) fasta scores: E(): 0.076, 25.52 38d in 474 aa.
       0.770
CBO2170
Hypothetical protein; No significant database matches.
       0.670
CBO2178
Hypothetical protein; No significant database matches.
       0.588
CBO2179
Conserved hypothetical protein.
       0.576
CBO2168
Putative membrane protein; No significant database matches.
       0.570
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.