CBO2187 protein (Clostridium botulinum A ATCC 3502)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

CBO2187

Putative exported protein; C-terminus is similar to the C-terminal region of Escherichia coli acetyl esterase Aes or b0476 SWALL:AES_ECOLI (SWALL:P23872) (319 aa) fasta scores: E(): 9.8e-14, 26.78 38d in 280 aa. (343 aa)

Predicted Functional Partners:

hymB

0.883

CBO1505

0.878

CBO3367

0.856

CBO2587

0.815

CBO1829

0.706

hymA

0.706

nifJ1

0.700

acp

0.626

acpP

0.626

fldL

0.598

Your Current Organism:

Clostridium botulinum A ATCC 3502

NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBO1505	CBO1829	CBO1505	CBO1829	Putative oxidoreductase.	Conserved hypothetical protein; Similar to the C-terminal region of several oxidoreductases such as Eubacterium acidaminophilum HymA protein.	0.912
CBO1505	CBO2187	CBO1505	CBO2187	Putative oxidoreductase.	Putative exported protein; C-terminus is similar to the C-terminal region of Escherichia coli acetyl esterase Aes or b0476 SWALL:AES_ECOLI (SWALL:P23872) (319 aa) fasta scores: E(): 9.8e-14, 26.78 38d in 280 aa.	0.878
CBO1505	CBO2587	CBO1505	CBO2587	Putative oxidoreductase.	Putative AMP-binding enzyme; Similar to an internal region of Bacillus licheniformis bacitracin synthetase 1 BacA SWALL:BACA_BACLI (SWALL:O68006) (5255 aa) fasta scores: E(): 4.3e-49, 33.15 38d in 561 aa.	0.902
CBO1505	CBO3367	CBO1505	CBO3367	Putative oxidoreductase.	Conserved hypothetical protein.	0.938
CBO1505	acp	CBO1505	CBO2455	Putative oxidoreductase.	Acyl carrier protein ACP; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.851
CBO1505	acpP	CBO1505	CBO3603	Putative oxidoreductase.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.851
CBO1505	fldL	CBO1505	CBO3293	Putative oxidoreductase.	Putative CoA-ligase.	0.465
CBO1505	hymA	CBO1505	CBO1849	Putative oxidoreductase.	Putative electron-transferring subunit of iron-only hydrogenase.	0.912
CBO1505	hymB	CBO1505	CBO1848	Putative oxidoreductase.	Putative electron-transferring subunit of iron-only hydrogenase.	0.996
CBO1505	nifJ1	CBO1505	CBO1192	Putative oxidoreductase.	Putative pyruvate-flavodoxin oxidoreductase; Also similar to CBO2760 (65.74 38d).	0.935
CBO1829	CBO1505	CBO1829	CBO1505	Conserved hypothetical protein; Similar to the C-terminal region of several oxidoreductases such as Eubacterium acidaminophilum HymA protein.	Putative oxidoreductase.	0.912
CBO1829	CBO2187	CBO1829	CBO2187	Conserved hypothetical protein; Similar to the C-terminal region of several oxidoreductases such as Eubacterium acidaminophilum HymA protein.	Putative exported protein; C-terminus is similar to the C-terminal region of Escherichia coli acetyl esterase Aes or b0476 SWALL:AES_ECOLI (SWALL:P23872) (319 aa) fasta scores: E(): 9.8e-14, 26.78 38d in 280 aa.	0.706
CBO1829	CBO2587	CBO1829	CBO2587	Conserved hypothetical protein; Similar to the C-terminal region of several oxidoreductases such as Eubacterium acidaminophilum HymA protein.	Putative AMP-binding enzyme; Similar to an internal region of Bacillus licheniformis bacitracin synthetase 1 BacA SWALL:BACA_BACLI (SWALL:O68006) (5255 aa) fasta scores: E(): 4.3e-49, 33.15 38d in 561 aa.	0.774
CBO1829	CBO3367	CBO1829	CBO3367	Conserved hypothetical protein; Similar to the C-terminal region of several oxidoreductases such as Eubacterium acidaminophilum HymA protein.	Conserved hypothetical protein.	0.899
CBO1829	acp	CBO1829	CBO2455	Conserved hypothetical protein; Similar to the C-terminal region of several oxidoreductases such as Eubacterium acidaminophilum HymA protein.	Acyl carrier protein ACP; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.774
CBO1829	acpP	CBO1829	CBO3603	Conserved hypothetical protein; Similar to the C-terminal region of several oxidoreductases such as Eubacterium acidaminophilum HymA protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.774
CBO1829	hymB	CBO1829	CBO1848	Conserved hypothetical protein; Similar to the C-terminal region of several oxidoreductases such as Eubacterium acidaminophilum HymA protein.	Putative electron-transferring subunit of iron-only hydrogenase.	0.999
CBO1829	nifJ1	CBO1829	CBO1192	Conserved hypothetical protein; Similar to the C-terminal region of several oxidoreductases such as Eubacterium acidaminophilum HymA protein.	Putative pyruvate-flavodoxin oxidoreductase; Also similar to CBO2760 (65.74 38d).	0.936
CBO2187	CBO1505	CBO2187	CBO1505	Putative exported protein; C-terminus is similar to the C-terminal region of Escherichia coli acetyl esterase Aes or b0476 SWALL:AES_ECOLI (SWALL:P23872) (319 aa) fasta scores: E(): 9.8e-14, 26.78 38d in 280 aa.	Putative oxidoreductase.	0.878
CBO2187	CBO1829	CBO2187	CBO1829	Putative exported protein; C-terminus is similar to the C-terminal region of Escherichia coli acetyl esterase Aes or b0476 SWALL:AES_ECOLI (SWALL:P23872) (319 aa) fasta scores: E(): 9.8e-14, 26.78 38d in 280 aa.	Conserved hypothetical protein; Similar to the C-terminal region of several oxidoreductases such as Eubacterium acidaminophilum HymA protein.	0.706

page 1 of 6

Server load: medium (42%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About