Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
etfA1Electron transfer flavoprotein alpha-subunit. (349 aa)    
Predicted Functional Partners:
etfB1
Electron transfer flavoprotein beta-subunit.
 0.994
CBO3198
Electron transfer flavoprotein beta-subunit.
 0.980
etfB2
Electron transfer flavoprotein beta-subunit.
 0.977
etfB
Electron transfer flavoprotein beta-subunit.
 0.974
acdB
acyl-CoA dehydrogenase, short-chain specific.
 
 0.940
bcd
butyryl-CoA dehydrogenase.
 
 0.856
acdA
Putative acyl-CoA dehydrogenase.
 
 0.851
glcD
Glycolate oxidase subunit.
  
 
 0.756
CBO2843
acyl-CoA dehydrogenase.
  
 
 0.719
fldZ
Cinnamate reductase; This enzyme was purified from C. sporogenes and its N-terminus sequenced (Dickert et al. 2000 Eur. J. Biochem. 267, 3874-3884.
  
 
 0.686
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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