STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
acdBacyl-CoA dehydrogenase, short-chain specific. (377 aa)    
Predicted Functional Partners:
crt
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.969
etfA1
Electron transfer flavoprotein alpha-subunit.
 
 0.940
etfB1
Electron transfer flavoprotein beta-subunit.
 
 
 0.927
hbd
3-hydroxybutyryl-CoA dehydrogenase.
 0.923
etfA2
Electron transfer flavoprotein alpha-subunit; N-terminal extension relative to homologues.
 
 0.905
CBO3197
Electron transfer flavoprotein alpha-subunit.
 
 0.828
thl
acetyl-CoA acetyltransferase (thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.814
etfB2
Electron transfer flavoprotein beta-subunit.
 
 
 0.795
CBO3198
Electron transfer flavoprotein beta-subunit.
 
 
 0.790
etfB
Electron transfer flavoprotein beta-subunit.
 
 
 0.772
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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