Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBO2264Putative oligopeptide transporter. (465 aa)    
Predicted Functional Partners:
CBO2263
Metallopeptidase family M24 protein; Similar to an internal region of Homo sapiens xaa-Pro aminopeptidase 2 precursor XPNPEP2 SWALL:XPP2_HUMAN (SWALL:O43895) (674 aa) fasta scores: E(): 1.1e-58, 31.58 38d in 611 aa. Similar to full length Clostridium perfringens probable aminopeptidase CPE0872 SWALL:Q8XM18 (EMBL:AP003188) (591 aa) fasta scores: E(): 1.8e-101, 45.22 38d in 597 aa.
 
  
 0.734
acdB
acyl-CoA dehydrogenase, short-chain specific.
      
 0.592
CBO1006
Conserved hypothetical protein.
      
 0.591
pepIP
Proline iminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
 
   
 0.449
CBO2262
Putative membrane protein.
       0.448
trxB3
Thioredoxin reductase.
  
   
 0.413
CBO2260A
Putative membrane protein.
 
     0.403
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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