STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO2269Hypothetical protein; No significant database matches. Doubtful CDS, poor translational start site. (35 aa)    
Predicted Functional Partners:
CBO2270
Hypothetical protein; N-terminus is similar to the N-terminal region of Clostridium tetani iron-sulfur flavoprotein CTC01006 SWALL:Q896J7 (EMBL:AE015939) (185 aa) fasta scores: E(): 2e-12, 44.18 38d in 129 aa. Weakly similar to the full length Escherichia coli putative NAD(P)H oxidoreductase b0901 SWALL:YCAK_ECOLI (SWALL:P43340) (196 aa) fasta scores: E(): 0.008, 22.34 38d in 188 aa.
       0.752
CBO2268
Conserved hypothetical protein.
       0.563
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.