Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO2343Hypothetical phage protein. (66 aa)    
Predicted Functional Partners:
CBO2344
Hypothetical phage protein; No significant database matches.
       0.816
CBO2347
Hypothetical phage protein; No significant database matches.
       0.806
CBO2341
Hypothetical phage protein.
       0.804
CBO2346
Hypothetical phage protein; No significant database matches.
       0.803
CBO2342
Hypothetical phage protein.
       0.792
CBO2348
Hypothetical phage protein; No significant database matches.
       0.777
CBO2345
Hypothetical phage protein; No significant database matches.
       0.757
CBO2349
Hypothetical phage protein; No significant database matches.
       0.757
CBO2340
Hypothetical phage protein.
       0.749
CBO2350
Phage capsid protein.
       0.641
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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