STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO2351Hypothetical phage protein. (130 aa)    
Predicted Functional Partners:
CBO2350
Phage capsid protein.
       0.806
CBO2352
Hypothetical phage protein.
       0.780
CBO2343
Hypothetical phage protein.
       0.611
CBO2347
Hypothetical phage protein; No significant database matches.
       0.597
CBO2348
Hypothetical phage protein; No significant database matches.
       0.595
CBO2344
Hypothetical phage protein; No significant database matches.
       0.589
CBO2346
Hypothetical phage protein; No significant database matches.
       0.589
CBO2349
Hypothetical phage protein; No significant database matches.
       0.587
CBO2345
Hypothetical phage protein; No significant database matches.
       0.585
CBO2342
Hypothetical phage protein.
       0.575
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.