Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO2383Hypothetical phage protein; No significant database matches. (285 aa)    
Predicted Functional Partners:
CBO2384
Hypothetical phage protein.
       0.776
CBO2382
Hypothetical phage protein; No significant database matches.
       0.773
CBO2381
Hypothetical phage protein; No significant database matches. Doubtful CDS.
       0.701
CBO2381A
Hypothetical phage protein.
       0.701
CBO2380
Putative membrane protein; No significant database matches.
       0.526
CBO2379
Hypothetical phage protein.
  
    0.492
CBO2378
Putative DNA replication protein.
       0.476
CBO2314
Hypothetical phage protein.
  
    0.462
CBO2377
Hypothetical phage protein; No significant database matches.
       0.437
CBO2385
Hypothetical phage protein; No significant database matches.
       0.421
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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