Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
CBO2497Putative phosphatase protein. (541 aa)    
Predicted Functional Partners:
CBO2498
Conserved hypothetical protein.
 
  
 0.993
CBO0590
Conserved hypothetical protein.
 
 0.992
CBO0218
Conserved hypothetical protein; Similar to Clostridium tetani degv protein degv or ctc00368 SWALL:Q898S4 (EMBL:AE015937) (280 aa) fasta scores: E(): 1.1e-66, 65.71 38d in 280 aa, and to Clostridium acetobutylicum hypothetical upf0230 protein Cac0701 SWALL:Y701_CLOAB (SWALL:Q97L61) (279 aa) fasta scores: E(): 5.9e-59, 60.21 38d in 279 aa.
 
 0.977
CBO1311
Conserved hypothetical protein.
 
 0.977
CBO2573
DegV family protein.
 
 0.952
recG
Putative ATP-dependent DNA helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
  
    0.655
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
       0.606
CBO1887
Conserved hypothetical protein.
 
  
 0.600
recN
DNA repair protein; May be involved in recombinational repair of damaged DNA.
   
    0.517
glmU
Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
   
    0.512
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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