Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CBO2529Hypothetical protein; Similar to the N-termina region of Bacillus cereus hypothetical protein BC4080 SWALL:Q819A6 (EMBL:AE017011) (181 aa) fasta scores: E(): 3, 31.25 38d in 48 aa. (53 aa)    
Predicted Functional Partners:
nrdR
Putative ATP-binding protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
       0.623
CBO2528
Conserved hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.427
CBO2527
Two-component response regulator.
       0.424
CBO2526
Two-component sensor kinase.
       0.419
CBO2531
Conserved hypothetical protein.
       0.409
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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