Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBO2686Putative sugar transferase. (225 aa)    
Predicted Functional Partners:
CBO2687
Tyrosine-protein kinase.
 
  
 0.931
CBO2689
Capsular polysaccharide biosynthesis protein.
 
  
 0.839
CBO2688
Protein-tyrosine phosphatase.
 
  
 0.783
CBO2684
Putative surface polysaccharide glycosyltransferase.
 
  
 0.711
CBO0102
Similar to Escherichia coli mannose-1-phosphate guanylyltransferase manc or rfbm or rfbm1 SWALL:RFM9_ECOLI (SWALL:P37753) (471 aa) fasta scores: E(): 5.4e-36, 36.51 id in 356 aa, and to Clostridium tetani mannose-6-phosphate isomerase ctc00265 SWALL:Q899C0 (EMBL:AE015936) (355 aa) fasta scores: E(): 5.9e-94,70.33 38d in 354 aa.
 
  
 0.690
tagA
Putative N-acetylmannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
    
 0.660
CBO2678
Putative capsular polysaccharide export protein (flippase).
  
  
 0.655
wzx-2
Putative O-antigen flippase.
 
  
 0.632
CBO3109
Capsular polysaccharide biosynthesis protein.
 
  
 0.623
CBO2685
UDP-galactopyranose mutase.
     
 0.607
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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