STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO2702Putative glycosyl transferase. (392 aa)    
Predicted Functional Partners:
CBO2701
Conserved hypothetical protein.
  
    0.761
CBO2703
Putative glycosyl transferase.
  
  
 0.731
CBO2766A
Putative glucose translocase.
  
  
 0.616
CBO3389
Putative membrane protein (pseudogene); 7 probable transmembrane helices predicted for CBO3388 by TMHMM2.0 at aa 4-18, 39-61, 66-88, 93-115,125-147, 168-190 and 212-234; Belongs to the peptidase S41A family.
  
 
 0.615
CBO2055
Glucose-1-phosphate thymidylyltransferase.
 
  
 0.601
nifJ1
Putative pyruvate-flavodoxin oxidoreductase; Also similar to CBO2760 (65.74 38d).
  
 
 0.595
CBO2700
Putative lipase/acylhydrolase.
  
  
 0.589
CBO2705
Putative glycosyl transferase.
  
  
 0.542
CBO2686
Putative sugar transferase.
 
  
 0.534
CBO2715
Probable DTDP-4-dehydrorhamnose 3,5-epimerase.
 
  
 0.530
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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