STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO2702Putative glycosyl transferase. (392 aa)    
Predicted Functional Partners:
CBO2701
Conserved hypothetical protein.
  
  
 0.770
CBO2703
Putative glycosyl transferase.
  
  
 0.738
nifJ1
Putative pyruvate-flavodoxin oxidoreductase; Also similar to CBO2760 (65.74 38d).
  
 
 0.693
CBO2766A
Putative glucose translocase.
  
  
 0.667
CBO2700
Putative lipase/acylhydrolase.
  
  
 0.593
CBO2681
Putative Cytidylyltransferase; Note that the C_terminal region is most similar to the Clostridial spore coat proteins.
 
  
 0.569
CBO2055
Glucose-1-phosphate thymidylyltransferase.
 
  
 0.565
CBO2714
Putative CDP-4-dehydro-6-deoxy-D-gulose 4-reductase.
 
 
 0.554
CBO2705
Putative glycosyl transferase.
  
  
 0.553
CBO2715
Probable DTDP-4-dehydrorhamnose 3,5-epimerase.
 
  
 0.539
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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