Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO2707Putative capsular polysaccharide synthesis protein; Weakly similar to the mentioned database matches. (473 aa)    
Predicted Functional Partners:
CBO2706
Putative asparagine synthetase.
  
  
0.674
CBO2705
Putative glycosyl transferase.
 
     0.656
CBO2708
Hypothetical protein; Note the database similarities are weak and only to the C-terminal region.
  
    0.634
CBO2704
Putative membrane protein.
       0.595
CBO2715
Probable DTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.524
CBO2710
Putative glycosyl transferase.
 
     0.510
CBO2703
Putative glycosyl transferase.
 
     0.480
CBO2702
Putative glycosyl transferase.
  
    0.437
CBO2719
Hypothetical protein; No significant database matches.
 
    
0.428
wzx
O antigen repeat unit flippase.
 
  
 0.425
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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