Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO2709Putative methyltransferase. (340 aa)    
Predicted Functional Partners:
CBO2710
Putative glycosyl transferase.
       0.773
CBO2713
Putative methyltransferase.
  
  
 0.577
CBO2716
Putative methyltransferase.
  
  
 0.577
CBO2681
Putative Cytidylyltransferase; Note that the C_terminal region is most similar to the Clostridial spore coat proteins.
 
     0.574
CBO2711
Radical SAM superfamily protein; No significant database matches.
       0.551
CBO2714
Putative CDP-4-dehydro-6-deoxy-D-gulose 4-reductase.
     
 0.546
CBO2715
Probable DTDP-4-dehydrorhamnose 3,5-epimerase.
       0.541
CBO2712
Putative hydroxylase.
       0.511
pseI
Putative N-acetylneuraminic acid synthetase.
 
     0.506
CBO2708
Hypothetical protein; Note the database similarities are weak and only to the C-terminal region.
       0.494
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.