Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBO2732Putative flagella-related conserved hypothetical protein. (113 aa)    
Predicted Functional Partners:
fliD
Flagellar hook-associated protein; C-terminal region is similar to Bacillus halodurans flagellar hook-associated protein 2 FliD or BH3614 SWALL:FLID_BACHD (SWALL:Q9K6W0) (532 aa) fasta scores: E(): 2.1e-14, 27.55 38d in 508 aa. Full length CDS is similar to Clostridium acetobutylicum flagellar hook-associated protein CAC2205 SWALL:Q97H10 (EMBL:AE007721) (638 aa) fasta scores: E(): 1e-23, 27.36 id in 826 aa.
       0.767
fliS
Flagellar protein FliS.
       0.659
CBO2736
FlaG protein.
       0.547
csrA
Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
       0.538
fliW
Putative flagella-related conserved hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
       0.538
CBO2731
Flagellin; Highly similar to the downstream CDS CBO2730 (98.9 id).
       0.511
CBO2735
Putative flagella-related conserved hypothetical protein.
       0.510
flgL
Flagellar hook-associated protein 3.
       0.467
flgK
Flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
       0.447
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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