Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBO2773Conserved hypothetical protein. (116 aa)    
Predicted Functional Partners:
CBO2772
Putative Na(+)/H(+) antiporter.
 
   
 0.937
glnA
Glutamine synthetase.
  
 
 0.721
CBO1851
Probable ADP-ribosylglycohydrolase.
   
 
 0.687
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.674
CBO2788
Putative membrane protein.
  
     0.632
purL
Formylglycinamidine ribonucleotide synthetase.
     
 0.584
CBO1368
Putative ABC transporter, substrate-binding lipoprotein.
   
 
 0.580
CBO3169
Putative ABC transporter, periplasmic-binding protein.
   
 
 0.580
CBO3254
Putative lipoprotein; Appears to have an extended C-terminus compared to most homologues.
   
 
 0.580
CBO1298
Putative cell wall anchored protein.
  
 
 
 0.568
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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