STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBO2788Putative membrane protein. (358 aa)    
Predicted Functional Partners:
CBO2789
ABC transporter ATP-binding protein.
 
     0.955
CBO2790
GntR-family transcriptional regulator.
 
     0.915
CBO2773
Conserved hypothetical protein.
  
     0.632
CBO1278
Conserved hypothetical protein.
  
     0.494
CBO2787
Putative membrane protein.
       0.493
CBO2791
Putative membrane protein.
       0.460
CBO1277
Putative membrane protein.
  
     0.434
CBO0677
Conserved hypothetical protein.
  
     0.430
CBO1430
Similarity to the Bacillus subtilis cell division protein FtsA is limited to the N-terminal region.
  
     0.405
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.