Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBO2831Putative secreted chitodextrinase; Weakly similar to the N-terminal region of Thermoanaerobacter thermosulfurogenes amylopullulanase precursor amyB SWALL:APU_THETU (SWALL:P38536) (1861 aa) fasta scores: E(): 6.8, 21.5 38d in 586 aa. (665 aa)    
Predicted Functional Partners:
Tgl
Putative transglutaminase.
  
     0.490
CBO2830
Putative ferric uptake regulation protein; Belongs to the Fur family.
       0.490
CBO1350
Putative membrane protein.
  
     0.415
CBO2613
Hypothetical protein; No significant database matches.
 
     0.406
CBO2322
Hypothetical phage protein; Poor database matches. C-terminus is weakly similar to the C-terminal region of Rhizobium loti hypothetical protein MSI089 SWALL:Q8KGX4 (EMBL:AL672112) (847 aa) fasta scores: E(): 1.5e-07, 26.54 38d in 584 aa.
 
     0.401
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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