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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBO2850Putative dehydrogenase, [2Fe-2S] binding subunit. (162 aa)    
Predicted Functional Partners:
CBO2852
Putative dehydrogenase, molybdenum binding subunit.
 
 0.996
xdhB2-2
Xanthine dehydrogenase, FAD-binding subunit.
 
 0.994
xdhA2
Xanthine dehydrogenase, molybdenum binding subunit.
 
 0.991
xdhA1
Similar to Escherichia coli xanthine dehydrogenase,molybdenum binding subunit XdhA or b2866 SWALL:XDHA_ECOLI (SWALL:Q46799) (752 aa) fasta scores: E(): 6e-37, 29.35 id in 780 aa, and to Bacillus halodurans hypothetical protein Bh1977 SWALL:Q9KBF1 (EMBL:AP001513) (1054 aa) fasta scores: E(): 1.7e-176, 59.58 38d in 767 aa.
 
 0.977
CBO2851
Putative dehydrogenase, FAD binding subunit.
 
 
 0.973
xdhB2
Similar to Escherichia coli xanthine dehydrogenase,FAD binding subunit XdhB or b2867 SWALL:XDHB_ECOLI (SWALL:Q46800) (292 aa) fasta scores: E(): 0.00013, 22.06 id in 281 aa, and to Bacillus cereus xanthine dehydrogenase fad-binding subunit bc3167 SWALL:Q81BJ0 (EMBL:AE017008) (279 aa) fasta scores: E(): 6.2e-54,52.89 38d in 276 aa.
 
 
 0.897
CBO2849
Conserved hypothetical protein.
 
  
 0.855
CBO2893
Putative xanthine dehydrogenase accessory protein.
 
  
 0.828
mocA
Conserved hypothetical protein.
 
  
 0.792
xdhAC
In Escherichia coli the molybdenum binding and iron-sulfur binding domains of xanthine dehydrogenase are carried on two separate genes, wheareas in this case they are present on a single gene.
 
 
0.707
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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